ENSDARG00000100083


Danio rerio

Features
Gene ID: ENSDARG00000100083
  
Biological name :sugt1
  
Synonyms : SGT1 homolog, MIS12 kinetochore complex assembly cochaperone / sugt1
  
Possible biological names infered from orthology : Q9CX34 / Q9Y2Z0
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 27977297
Gene end: 28020042
  
Corresponding Affymetrix probe sets: Dr.2411.1.A1_at (Zebrafish Array)   Dr.2411.2.S1_at (Zebrafish Array)   NM_001007361_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000139631
Ensembl peptide - ENSDARP00000148100
Ensembl peptide - ENSDARP00000135565
NCBI entrez gene - 492489     See in Manteia.
RefSeq - NM_001007361
RefSeq Peptide - NP_001007362
swissprot - A0A0R4IS86
swissprot - Q5U3E4
ZFIN ID - ZDB-GENE-041114-56
Ensembl - ENSDARG00000100083
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SUGT1ENSGALG00000016946Gallus gallus
 SUGT1ENSG00000165416Homo sapiens
 Sugt1ENSMUSG00000022024Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007052  CS domain
 IPR007699  SGS domain
 IPR008978  HSP20-like chaperone
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013026  Tetratricopeptide repeat-containing domain
 IPR019734  Tetratricopeptide repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr