ENSDARG00000101096


Danio rerio

Features
Gene ID: ENSDARG00000101096
  
Biological name :cebp1
  
Synonyms : CCAAT/enhancer binding protein (C/EBP) 1 / cebp1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 40820699
Gene end: 40830494
  
Corresponding Affymetrix probe sets: DrAffx.1.1.S1_at (Zebrafish Array)   DrAffx.1.1.S1_x_at (Zebrafish Array)   NM_131837_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000142714
NCBI entrez gene - 114453     See in Manteia.
RefSeq - NM_131837
RefSeq Peptide - NP_571912
swissprot - A0A1D5NSQ7
ZFIN ID - ZDB-GENE-010611-1
Ensembl - ENSDARG00000101096
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cebpb / CCAAT/enhancer binding protein (C/EBP), beta / P17676* / CCAAT/enhancer binding protein beta*ENSDARG0000004272531
cebpa / CCAAT/enhancer binding protein (C/EBP), alpha / P49715* / P53566* / CCAAT/enhancer binding protein alpha*ENSDARG0000003607430
cebpd / CCAAT/enhancer binding protein (C/EBP), delta / P49716* / CCAAT/enhancer binding protein delta*ENSDARG0000008730325
cebpg / CCAAT/enhancer binding protein (C/EBP), gamma / P53567* / P53568* / CCAAT/enhancer binding protein gamma*ENSDARG0000003607321


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0010628 positive regulation of gene expression IMP
 biological_processGO:0030099 myeloid cell differentiation IMP
 biological_processGO:0045658 regulation of neutrophil differentiation IMP
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IGI
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005028 ventral wall of dorsal aorta ventral wall of dorsal aorta hematopoietic multipotent progenitor cell decreased amount , abnormal
Show

 ZFA:0009327 neutrophil neutrophil decreased amount , abnormal
neutrophil granular vesicle decreased amount , abnormal
neutrophil immature , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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