ENSDARG00000042725


Danio rerio

Features
Gene ID: ENSDARG00000042725
  
Biological name :cebpb
  
Synonyms : CCAAT/enhancer binding protein (C/EBP), beta / cebpb
  
Possible biological names infered from orthology : CCAAT/enhancer binding protein beta / P17676 / P28033
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 28448267
Gene end: 28449782
  
Corresponding Affymetrix probe sets: Dr.6575.1.S1_at (Zebrafish Array)   NM_131884_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000062701
NCBI entrez gene - 140814     See in Manteia.
RefSeq - NM_131884
RefSeq Peptide - NP_571959
swissprot - Q8UVZ0
ZFIN ID - ZDB-GENE-020111-3
Ensembl - ENSDARG00000042725
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CEBPBENSGALG00000008014Gallus gallus
 CEBPBENSG00000172216Homo sapiens
 CebpbENSMUSG00000056501Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cebpa / CCAAT/enhancer binding protein (C/EBP), alpha / P49715* / P53566* / CCAAT/enhancer binding protein alpha*ENSDARG0000003607430
cebpd / CCAAT/enhancer binding protein (C/EBP), delta / P49716* / CCAAT/enhancer binding protein delta*ENSDARG0000008730326
cebp1 / CCAAT/enhancer binding protein (C/EBP) 1ENSDARG0000010109619
cebpg / CCAAT/enhancer binding protein (C/EBP), gamma / P53567* / P53568* / CCAAT/enhancer binding protein gamma*ENSDARG0000003607316


Protein motifs (from Interpro)
Interpro ID Name
 IPR004827  Basic-leucine zipper domain
 IPR016468  CCAAT/enhancer-binding protein, chordates


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001878 response to yeast IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009617 response to bacterium IDA
 biological_processGO:0044030 regulation of DNA methylation IGI
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
Senescence-Associated Secretory Phenotype (SASP)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000029 hindbrain hindbrain macrophage amount , ameliorated
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 ZFA:0000128 midbrain midbrain macrophage amount , ameliorated
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 ZFA:0001115 trunk trunk amount , ameliorated
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 ZFA:0009141 macrophage macrophage amount , ameliorated
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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