ENSDARG00000101472


Danio rerio

Features
Gene ID: ENSDARG00000101472
  
Biological name :pop4
  
Synonyms : pop4 / POP4 homolog, ribonuclease P/MRP subunit
  
Possible biological names infered from orthology : O95707 / processing of precursor 4, ribonuclease P/MRP family, (S. cerevisiae) / Q9CR08
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 45963767
Gene end: 45971641
  
Corresponding Affymetrix probe sets: Dr.6289.1.S1_at (Zebrafish Array)   NM_001020749_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000137725
Ensembl peptide - ENSDARP00000141622
NCBI entrez gene - 553787     See in Manteia.
RefSeq - NM_001020749
RefSeq - XM_005166455
RefSeq Peptide - NP_001018585
swissprot - A0A0R4IWU0
swissprot - A0A0R4ITA6
ZFIN ID - ZDB-GENE-050522-505
Ensembl - ENSDARG00000101472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 POP4ENSGALG00000041972Gallus gallus
 POP4ENSG00000105171Homo sapiens
 Pop4ENSMUSG00000030423Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002730  Ribonuclease P/MRP, subunit p29
 IPR016848  Ribonuclease P/MRP, p29 subunit
 IPR023534  Rof/RNase P-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006379 mRNA cleavage IEA
 biological_processGO:0008033 tRNA processing IEA
 cellular_componentGO:0000172 ribonuclease MRP complex IEA
 cellular_componentGO:0005655 nucleolar ribonuclease P complex IEA
 cellular_componentGO:0030677 ribonuclease P complex IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004540 ribonuclease activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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