ENSG00000105171


Homo sapiens

Features
Gene ID: ENSG00000105171
  
Biological name :POP4
  
Synonyms : O95707 / POP4 / POP4 homolog, ribonuclease P/MRP subunit
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q12
Gene start: 29604017
Gene end: 29617237
  
Corresponding Affymetrix probe sets: 202868_s_at (Human Genome U133 Plus 2.0 Array)   227583_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000467990
Ensembl peptide - ENSP00000468718
Ensembl peptide - ENSP00000468215
Ensembl peptide - ENSP00000221770
Ensembl peptide - ENSP00000465213
Ensembl peptide - ENSP00000465456
NCBI entrez gene - 10775     See in Manteia.
OMIM - 606114
RefSeq - NM_006627
RefSeq Peptide - NP_006618
swissprot - K7ERD7
swissprot - K7ESH8
swissprot - A0A0A0MQS4
swissprot - O95707
swissprot - K7EK50
swissprot - K7EQV2
Ensembl - ENSG00000105171
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pop4ENSDARG00000101472Danio rerio
 POP4ENSGALG00000041972Gallus gallus
 Pop4ENSMUSG00000030423Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002730  Ribonuclease P/MRP, subunit p29
 IPR016848  Ribonuclease P/MRP, p29 subunit
 IPR023534  Rof/RNase P-like
 IPR036980  Ribonuclease P/MRP, subunit p29 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001682 tRNA 5"-leader removal TAS
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006379 mRNA cleavage IEA
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0000172 ribonuclease MRP complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005655 nucleolar ribonuclease P complex IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0030677 ribonuclease P complex IEA
 cellular_componentGO:0030681 multimeric ribonuclease P complex IDA
 molecular_functionGO:0000171 ribonuclease MRP activity IBA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004526 ribonuclease P activity TAS
 molecular_functionGO:0004540 ribonuclease activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0033204 ribonuclease P RNA binding IBA


Pathways (from Reactome)
Pathway description
tRNA processing in the nucleus


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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