ENSDARG00000101713


Danio rerio

Features
Gene ID: ENSDARG00000101713
  
Biological name :scn2b
  
Synonyms : scn2b / sodium channel, voltage-gated, type II, beta
  
Possible biological names infered from orthology : O60939 / Q56A07 / Sodium channel subunit beta-2 / sodium voltage-gated channel beta subunit 2
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 12521379
Gene end: 12545683
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000131257
Ensembl peptide - ENSDARP00000138751
NCBI entrez gene - 777666     See in Manteia.
swissprot - Q06W28
swissprot - Q06W30
ZFIN ID - ZDB-GENE-070920-1
Ensembl - ENSDARG00000101713
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCN2BENSGALG00000021272Gallus gallus
 SCN2BENSG00000149575Homo sapiens
 Scn2bENSMUSG00000070304Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scn4bb / sodium channel, voltage-gated, type IV, beta b / SCN4B* / Q8IWT1* / Q7M729* / Sodium channel subunit beta-4 * / sodium voltage-gated channel beta subunit 4*ENSDARG0000006031920
scn4ba / sodium channel, voltage-gated, type IV, beta a / SCN4B* / Q8IWT1* / Q7M729* / Sodium channel subunit beta-4 * / sodium voltage-gated channel beta subunit 4*ENSDARG0000009903120


Protein motifs (from Interpro)
Interpro ID Name
 IPR000920  Myelin P0 protein-related
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR029873  Sodium channel subunit beta-2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0001518 voltage-gated sodium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0017080 sodium channel regulator activity IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr