ENSDARG00000060319


Danio rerio

Features
Gene ID: ENSDARG00000060319
  
Biological name :scn4bb
  
Synonyms : scn4bb / sodium channel, voltage-gated, type IV, beta b
  
Possible biological names infered from orthology : Q7M729 / Q8IWT1 / SCN4B / Sodium channel subunit beta-4 / sodium voltage-gated channel beta subunit 4
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 37918810
Gene end: 37935621
  
Corresponding Affymetrix probe sets: Dr.18736.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000122908
Ensembl peptide - ENSDARP00000154888
Ensembl peptide - ENSDARP00000079303
Ensembl peptide - ENSDARP00000109051
NCBI entrez gene - 567239     See in Manteia.
swissprot - A2BGB6
swissprot - F1QWP4
swissprot - Q06W25
ZFIN ID - ZDB-GENE-031116-71
Ensembl - ENSDARG00000060319
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCN4BENSGALG00000007409Gallus gallus
 SCN4BENSG00000177098Homo sapiens
 Scn4bENSMUSG00000046480Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
scn4ba / sodium channel, voltage-gated, type IV, beta a / SCN4B* / Q8IWT1* / Q7M729* / Sodium channel subunit beta-4 * / sodium voltage-gated channel beta subunit 4*ENSDARG0000009903154
scn2b / sodium channel, voltage-gated, type II, beta / Q56A07* / O60939* / Sodium channel subunit beta-2 * / sodium voltage-gated channel beta subunit 2*ENSDARG0000010171319


Protein motifs (from Interpro)
Interpro ID Name
 IPR000920  Myelin P0 protein-related
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr