ENSGALG00000007409


Gallus gallus

Features
Gene ID: ENSGALG00000007409
  
Biological name :SCN4B
  
Synonyms : SCN4B / sodium voltage-gated channel beta subunit 4
  
Possible biological names infered from orthology : Q7M729 / Q8IWT1 / Sodium channel subunit beta-4
  
Species: Gallus gallus
  
Chr. number: 24
Strand: -1
Band:
Gene start: 5417708
Gene end: 5420171
  
Corresponding Affymetrix probe sets: Gga.11352.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011971
NCBI entrez gene - 419774     See in Manteia.
RefSeq - XM_015298255
RefSeq - XM_417913
swissprot - F1N9L4
Ensembl - ENSGALG00000007409
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scn4baENSDARG00000099031Danio rerio
 scn4bbENSDARG00000060319Danio rerio
 SCN4BENSG00000177098Homo sapiens
 Scn4bENSMUSG00000046480Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SCN2B / sodium voltage-gated channel beta subunit 2 / O60939* / Q56A07* / Sodium channel subunit beta-2 *ENSGALG0000002127224


Protein motifs (from Interpro)
Interpro ID Name
 IPR000920  Myelin P0 protein-related
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006814 sodium ion transport IEA
 biological_processGO:0010765 positive regulation of sodium ion transport IEA
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0060048 cardiac muscle contraction IEA
 biological_processGO:0060307 regulation of ventricular cardiac muscle cell membrane repolarization IEA
 biological_processGO:0086002 cardiac muscle cell action potential involved in contraction IEA
 biological_processGO:0086012 membrane depolarization during cardiac muscle cell action potential IEA
 biological_processGO:0086016 AV node cell action potential IEA
 biological_processGO:0086091 regulation of heart rate by cardiac conduction IEA
 biological_processGO:2000649 regulation of sodium ion transmembrane transporter activity IEA
 cellular_componentGO:0001518 voltage-gated sodium channel complex IEA
 cellular_componentGO:0014704 intercalated disc IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031226 intrinsic component of plasma membrane IEA
 molecular_functionGO:0005248 voltage-gated sodium channel activity IEA
 molecular_functionGO:0017080 sodium channel regulator activity IEA
 molecular_functionGO:0044325 ion channel binding IEA
 molecular_functionGO:0086006 voltage-gated sodium channel activity involved in cardiac muscle cell action potential IEA


Pathways (from Reactome)
Pathway description
Phase 0 - rapid depolarisation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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