ENSDARG00000101886


Danio rerio

Features
Gene ID: ENSDARG00000101886
  
Biological name :pdxdc1
  
Synonyms : pdxdc1 / pyridoxal-dependent decarboxylase domain containing 1
  
Possible biological names infered from orthology : Q6P996 / Q99K01
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 36616713
Gene end: 36644776
  
Corresponding Affymetrix probe sets: Dr.2931.1.A1_at (Zebrafish Array)   NM_001004552_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000150339
Ensembl peptide - ENSDARP00000136697
NCBI entrez gene - 447813     See in Manteia.
RefSeq - NM_001004552
RefSeq - XM_009299626
RefSeq Peptide - NP_001004552
swissprot - A0A0R4IQA6
ZFIN ID - ZDB-GENE-040912-16
Ensembl - ENSDARG00000101886
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PDXDC1ENSGALG00000034829Gallus gallus
 PDXDC1ENSG00000179889Homo sapiens
 Pdxdc1ENSMUSG00000022680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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