ENSMUSG00000022680


Mus musculus

Features
Gene ID: ENSMUSG00000022680
  
Biological name :Pdxdc1
  
Synonyms : Pdxdc1 / pyridoxal-dependent decarboxylase domain containing 1 / Q99K01
  
Possible biological names infered from orthology : Q6P996
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: A1
Gene start: 13833148
Gene end: 13903131
  
Corresponding Affymetrix probe sets: 10437817 (MoGene1.0st)   1419327_at (Mouse Genome 430 2.0 Array)   1428200_a_at (Mouse Genome 430 2.0 Array)   1436372_a_at (Mouse Genome 430 2.0 Array)   1452705_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000111471
Ensembl peptide - ENSMUSP00000023361
Ensembl peptide - ENSMUSP00000111468
Ensembl peptide - ENSMUSP00000111469
NCBI entrez gene - 94184     See in Manteia.
MGI - MGI:1920909
RefSeq - XM_011246055
RefSeq - NM_001039533
RefSeq - NM_001291017
RefSeq - NM_053181
RefSeq - XM_006522790
RefSeq - XM_011246053
RefSeq - XM_011246054
RefSeq Peptide - NP_444411
RefSeq Peptide - NP_001034622
RefSeq Peptide - NP_001277946
swissprot - D3YZA7
swissprot - Q99K01
swissprot - A0A0R4J034
Ensembl - ENSMUSG00000022680
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdxdc1ENSDARG00000101886Danio rerio
 PDXDC1ENSGALG00000034829Gallus gallus
 PDXDC1ENSG00000179889Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA
 molecular_functionGO:0045296 cadherin binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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