ENSG00000179889


Homo sapiens

Features
Gene ID: ENSG00000179889
  
Biological name :PDXDC1
  
Synonyms : PDXDC1 / pyridoxal dependent decarboxylase domain containing 1 / Q6P996
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: p13.11
Gene start: 14974591
Gene end: 15139339
  
Corresponding Affymetrix probe sets: 1555347_at (Human Genome U133 Plus 2.0 Array)   1560013_at (Human Genome U133 Plus 2.0 Array)   1560014_s_at (Human Genome U133 Plus 2.0 Array)   212053_at (Human Genome U133 Plus 2.0 Array)   232288_at (Human Genome U133 Plus 2.0 Array)   237354_at (Human Genome U133 Plus 2.0 Array)   238957_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000486662
Ensembl peptide - ENSP00000455613
Ensembl peptide - ENSP00000455914
Ensembl peptide - ENSP00000457417
Ensembl peptide - ENSP00000322807
Ensembl peptide - ENSP00000379691
Ensembl peptide - ENSP00000391147
Ensembl peptide - ENSP00000406703
Ensembl peptide - ENSP00000437835
Ensembl peptide - ENSP00000454279
Ensembl peptide - ENSP00000454791
Ensembl peptide - ENSP00000454910
Ensembl peptide - ENSP00000455070
Ensembl peptide - ENSP00000455486
NCBI entrez gene - 23042     See in Manteia.
NCBI entrez gene - 102724985     See in Manteia.
OMIM - 614244
RefSeq - XM_017023065
RefSeq - NM_001285444
RefSeq - NM_001285445
RefSeq - NM_001285447
RefSeq - NM_001285448
RefSeq - NM_001285449
RefSeq - NM_001285450
RefSeq - NM_001324019
RefSeq - NM_001324020
RefSeq - NM_001324021
RefSeq - NM_015027
RefSeq - XM_005255173
RefSeq - XM_005255176
RefSeq - XM_006720865
RefSeq - XM_016999667
RefSeq - XM_017023059
RefSeq - XM_017023060
RefSeq - XM_017023061
RefSeq - XM_017023062
RefSeq - XM_017023063
RefSeq - XM_017023064
RefSeq Peptide - NP_001272376
RefSeq Peptide - NP_001272377
RefSeq Peptide - NP_001272378
RefSeq Peptide - NP_001272379
RefSeq Peptide - NP_001310948
RefSeq Peptide - NP_001310949
RefSeq Peptide - NP_001310950
RefSeq Peptide - NP_055842
RefSeq Peptide - NP_001272373
RefSeq Peptide - NP_001272374
swissprot - Q6P996
swissprot - H3BNL6
swissprot - H3BPV5
swissprot - H3BQ54
swissprot - H3BQS3
swissprot - H3BU11
swissprot - J3KNK7
swissprot - Q86XE2
swissprot - H3BM88
swissprot - H3BND4
Ensembl - ENSG00000179889
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pdxdc1ENSDARG00000101886Danio rerio
 PDXDC1ENSGALG00000034829Gallus gallus
 Pdxdc1ENSMUSG00000022680Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002129  Pyridoxal phosphate-dependent decarboxylase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0019752 carboxylic acid metabolic process IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0016829 lyase activity IEA
 molecular_functionGO:0016831 carboxy-lyase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA
 molecular_functionGO:0045296 cadherin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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