ENSDARG00000102023


Danio rerio

Features
Gene ID: ENSDARG00000102023
  
Biological name :phf13
  
Synonyms : PHD finger protein 13 / phf13
  
Possible biological names infered from orthology : Q86YI8 / Q8K2W6
  
Species: Danio rerio
  
Chr. number: 11
Strand: 1
Band:
Gene start: 41089574
Gene end: 41105632
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140246
Ensembl peptide - ENSDARP00000151506
NCBI entrez gene - 100537300     See in Manteia.
swissprot - A0A0G2L648
ZFIN ID - ZDB-GENE-121113-2
Ensembl - ENSDARG00000102023
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF13ENSGALG00000028148Gallus gallus
 PHF13ENSG00000116273Homo sapiens
 Phf13ENSMUSG00000047777Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
phf23b / Q7SXB5 / PHD finger protein 23b / PHF23* / Q9BUL5* / Q8BSN5* / PHD finger protein 23*ENSDARG0000003630527
phf23a / Q5BJ10 / PHD finger protein 23a / PHF23* / Q9BUL5* / Q8BSN5* / PHD finger protein 23*ENSDARG0000003088724


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007076 mitotic chromosome condensation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr