ENSDARG00000102734


Danio rerio

Features
Gene ID: ENSDARG00000102734
  
Biological name :wdr48a
  
Synonyms : wdr48a / WD repeat domain 48a
  
Possible biological names infered from orthology : Q8BH57 / Q8TAF3 / WDR48 / WD repeat domain 48
  
Species: Danio rerio
  
Chr. number: 24
Strand: -1
Band:
Gene start: 40876247
Gene end: 40901410
  
Corresponding Affymetrix probe sets: Dr.17216.1.A1_at (Zebrafish Array)   NM_001077795_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000131869
NCBI entrez gene - 777754     See in Manteia.
RefSeq - NM_001077795
RefSeq Peptide - NP_001071263
swissprot - F1R8P7
ZFIN ID - ZDB-GENE-061110-55
Ensembl - ENSDARG00000102734
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 WDR48ENSGALG00000006052Gallus gallus
 WDR48ENSG00000114742Homo sapiens
 Wdr48ENSMUSG00000032512Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
wdr48b / Q6PFM9 / WD repeat domain 48b / WDR48* / Q8TAF3* / Q8BH57* / WD repeat domain 48*ENSDARG0000003854390


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
Recognition of DNA damage by PCNA-containing replication complex
Ub-specific processing proteases
Fanconi Anemia Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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