ENSDARG00000103027


Danio rerio

Features
Gene ID: ENSDARG00000103027
  
Biological name :clns1a
  
Synonyms : chloride channel, nucleotide-sensitive, 1A / clns1a
  
Possible biological names infered from orthology : chloride nucleotide-sensitive channel 1A / P54105
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 3140682
Gene end: 3153275
  
Corresponding Affymetrix probe sets: Dr.656.1.S1_at (Zebrafish Array)   NM_131424_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000133397
NCBI entrez gene - 30699     See in Manteia.
RefSeq - NM_131424
RefSeq Peptide - NP_571499
swissprot - A0A0R4IJ12
ZFIN ID - ZDB-GENE-990415-259
Ensembl - ENSDARG00000103027
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CLNS1AENSGALG00000008574Gallus gallus
 CLNS1AENSG00000074201Homo sapiens
 Clns1aENSMUSG00000025439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003521  ICln


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0006884 cell volume homeostasis IEA
 biological_processGO:0048675 axon extension IMP
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0034709 methylosome IEA
 cellular_componentGO:0034715 pICln-Sm protein complex IEA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009052 motor neuron motor neuron axon truncated , abnormal
motor neuron axon branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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