ENSG00000074201


Homo sapiens

Features
Gene ID: ENSG00000074201
  
Biological name :CLNS1A
  
Synonyms : chloride nucleotide-sensitive channel 1A / CLNS1A / P54105
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q14.1
Gene start: 77514936
Gene end: 77637805
  
Corresponding Affymetrix probe sets: 209143_s_at (Human Genome U133 Plus 2.0 Array)   242492_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000434311
Ensembl peptide - ENSP00000263309
Ensembl peptide - ENSP00000433919
Ensembl peptide - ENSP00000434963
Ensembl peptide - ENSP00000475218
Ensembl peptide - ENSP00000436245
Ensembl peptide - ENSP00000432570
Ensembl peptide - ENSP00000433741
NCBI entrez gene - 1207     See in Manteia.
OMIM - 602158
RefSeq - NM_001311202
RefSeq - NM_001293
RefSeq - NM_001311199
RefSeq - NM_001311200
RefSeq - NM_001311201
RefSeq Peptide - NP_001284
RefSeq Peptide - NP_001298131
RefSeq Peptide - NP_001298130
RefSeq Peptide - NP_001298129
RefSeq Peptide - NP_001298128
swissprot - U3KPU0
swissprot - E9PJF4
swissprot - E9PMI6
swissprot - E9PQ83
swissprot - H0YEN9
swissprot - J3KN38
swissprot - P54105
Ensembl - ENSG00000074201
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clns1aENSDARG00000103027Danio rerio
 CLNS1AENSGALG00000008574Gallus gallus
 Clns1aENSMUSG00000025439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003521  ICln


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000387 spliceosomal snRNP assembly TAS
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0006884 cell volume homeostasis IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0034709 methylosome IDA
 cellular_componentGO:0034715 pICln-Sm protein complex IDA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046982 protein heterodimerization activity IDA


Pathways (from Reactome)
Pathway description
snRNP Assembly


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100462 PRMT5 / O14744 / protein arginine methyltransferase 5  / complex
 ENSG00000116455 WDR77 / Q9BQA1 / WD repeat domain 77  / complex






 

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