ENSDARG00000103566


Danio rerio

Features
Gene ID: ENSDARG00000103566
  
Biological name :tomm20b
  
Synonyms : Q6DH66 / tomm20b / translocase of outer mitochondrial membrane 20b
  
Possible biological names infered from orthology : Q15388 / Q9DCC8 / TOMM20 / translocase of outer mitochondrial membrane 20 / translocase of outer mitochondrial membrane 20 homolog (yeast)
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 44637516
Gene end: 44647315
  
Corresponding Affymetrix probe sets: Dr.15589.1.S1_at (Zebrafish Array)   Dr.15589.2.A1_at (Zebrafish Array)   NM_001002698_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000134847
Ensembl peptide - ENSDARP00000130577
NCBI entrez gene - 436971     See in Manteia.
RefSeq - NM_001002698
RefSeq Peptide - NP_001002698
swissprot - A0A0R4IIS9
swissprot - Q6DH66
ZFIN ID - ZDB-GENE-040718-451
Ensembl - ENSDARG00000103566
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TOMM20ENSGALG00000035299Gallus gallus
 Q15388ENSG00000173726Homo sapiens
 Q9DCC8ENSMUSG00000093904Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tomm20a / translocase of outer mitochondrial membrane 20ENSDARG0000010316382


Protein motifs (from Interpro)
Interpro ID Name
 IPR002056  Protein import receptor MAS20
 IPR022422  Protein import receptor MAS20, metazoan
 IPR023392  Mitochondrial outer membrane translocase complex, Tom20 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006605 protein targeting IEA
 biological_processGO:0006886 intracellular protein transport IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016031 tRNA import into mitochondrion IBA
 biological_processGO:0030150 protein import into mitochondrial matrix IBA
 biological_processGO:0070096 mitochondrial outer membrane translocase complex assembly IBA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005742 mitochondrial outer membrane translocase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031307 integral component of mitochondrial outer membrane IBA
 molecular_functionGO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity IBA
 molecular_functionGO:0030943 mitochondrion targeting sequence binding IBA


Pathways (from Reactome)
Pathway description
Pink/Parkin Mediated Mitophagy
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000056842 usp30 / A2BGT0 / ubiquitin specific peptidase 30 / Q3UN04* / Q70CQ3*  / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr