ENSDARG00000103665


Danio rerio

Features
Gene ID: ENSDARG00000103665
  
Biological name :brpf1
  
Synonyms : bromodomain and PHD finger containing, 1 / brpf1
  
Possible biological names infered from orthology : B2RRD7 / P55201 / Peregrin
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 54135642
Gene end: 54155096
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132922
Ensembl peptide - ENSDARP00000141601
swissprot - A0A0G2L9X9
swissprot - H9GXF8
ZFIN ID - ZDB-GENE-040426-731
Ensembl - ENSDARG00000103665
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BRPF1ENSGALG00000033529Gallus gallus
 BRPF1ENSG00000156983Homo sapiens
 Brpf1ENSMUSG00000001632Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
brd1a / bromodomain containing 1a / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000001359636
brpf3a / bromodomain and PHD finger containing, 3a / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007051335
brpf3b / bromodomain and PHD finger containing, 3b / BRPF3* / Q9ULD4* / bromodomain and PHD finger containing 3*ENSDARG0000007423835
brd1b / bromodomain containing 1b / BRD1* / O95696* / bromodomain containing 1*ENSDARG0000005179830
jade3 / jade family PHD finger 3 / Q6IE82* / Q92613* / Protein Jade-3 *ENSDARG0000001961412
jade2 / jade family PHD finger 2 / Q6ZQF7* / Q9NQC1* / Mus musculus jade family PHD finger 2 (Jade2), transcript variant 1, mRNA.*ENSDARG0000005338912
jade1 / jade family PHD finger 1 / Q6IE81* / Q6ZPI0* / Protein Jade-1 *ENSDARG0000003370712
mllt10 / MLLT10, histone lysine methyltransferase DOT1L cofactor / O54826* / P55197* / myeloid/lymphoid or mixed-lineage leukemia; translocated to, 10*ENSDARG0000004540111
phf14 / PHD finger protein 14 / O94880* / Q9D4H9*ENSDARG0000006145811


Protein motifs (from Interpro)
Interpro ID Name
 IPR000313  PWWP domain
 IPR001487  Bromodomain
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR019542  Enhancer of polycomb-like, N-terminal
 IPR019786  Zinc finger, PHD-type, conserved site
 IPR019787  Zinc finger, PHD-finger
 IPR034732  Extended PHD (ePHD) domain
 IPR035502  BR140-related, PWWD domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0009952 anterior/posterior pattern specification IMP
 cellular_componentGO:0000790 nuclear chromatin IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0042393 histone binding IMP
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Regulation of TP53 Activity through Acetylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000250 opercle opercle decreased size , abnormal
opercle aplastic , abnormal
Show

 ZFA:0000316 basihyal bone basihyal bone decreased size , abnormal
basihyal bone aplastic , abnormal
Show

 ZFA:0000363 hypobranchial bone hypobranchial bone aplastic , abnormal
Show

 ZFA:0000476 branchiostegal ray branchiostegal ray aplastic , abnormal
Show

 ZFA:0000488 ceratobranchial bone ceratobranchial bone increased width , abnormal
Show

 ZFA:0000578 ceratohyal bone ceratohyal bone morphology , abnormal
ceratohyal bone shape , abnormal
ceratohyal bone inverted , abnormal
ceratohyal bone aplastic , abnormal
Show

 ZFA:0000672 hyomandibula hyomandibula decreased size , abnormal
hyomandibula aplastic , abnormal
Show

 ZFA:0000692 symplectic symplectic decreased length , abnormal
Show

 ZFA:0001205 Meckel s cartilage Meckels cartilage shape , abnormal
Show

 ZFA:0001276 pharyngeal arch 2 skeleton pharyngeal arch 2 skeleton decreased length , abnormal
pharyngeal arch 2 skeleton increased width , abnormal
pharyngeal arch 2 skeleton bifurcated , abnormal
Show

 ZFA:0001399 palatoquadrate cartilage palatoquadrate cartilage shape , abnormal
Show

 ZFA:0001422 hyosymplectic cartilage hyosymplectic cartilage shape , abnormal
Show

 ZFA:0001510 basihyal cartilage basihyal cartilage decreased size , abnormal
basihyal cartilage aplastic , abnormal
Show

 ZFA:0001511 interhyal cartilage interhyal cartilage shape , abnormal
Show

 ZFA:0001522 hypobranchial cartilage hypobranchial cartilage decreased size , abnormal
Show

 ZFA:0001524 hypobranchial 1 cartilage hypobranchial 1 cartilage aplastic , abnormal
Show

 ZFA:0001525 hypobranchial 2 cartilage hypobranchial 2 cartilage aplastic , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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