ENSDARG00000103811


Danio rerio

Features
Gene ID: ENSDARG00000103811
  
Biological name :agla
  
Synonyms : agla / amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase a
  
Possible biological names infered from orthology : AGL / amylo-1,6-glucosidase, 4-alpha-glucanotransferase / amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase / P35573
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 20472150
Gene end: 20526830
  
Corresponding Affymetrix probe sets: Dr.22801.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000130374
Ensembl peptide - ENSDARP00000138992
NCBI entrez gene - 567798     See in Manteia.
RefSeq - NM_001172653
RefSeq - XM_005163618
RefSeq - XM_005163617
RefSeq - XM_009298484
RefSeq - XM_009298483
RefSeq Peptide - NP_001166124
swissprot - A0A0R4IV67
swissprot - A0A0R4IA63
ZFIN ID - ZDB-GENE-071004-6
Ensembl - ENSDARG00000103811
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGLENSGALG00000005407Gallus gallus
 AGLENSG00000162688Homo sapiens
 AglENSMUSG00000033400Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
aglb / amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase b / AGL* / P35573* / amylo-1,6-glucosidase, 4-alpha-glucanotransferase* / amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase*ENSDARG0000010035249
LO018627.1 / AGL* / P35573* / amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase*ENSDARG0000010663011


Protein motifs (from Interpro)
Interpro ID Name
 IPR006421  Glycogen debranching enzyme, metazoa
 IPR008928  Six-hairpin glycosidase superfamily
 IPR010401  Glycogen debranching enzyme
 IPR017853  Glycoside hydrolase superfamily
 IPR029436  Eukaryotic glycogen debranching enzyme, N-terminal domain
 IPR032788  Glycogen debranching enzyme, central domain
 IPR032790  Glycogen debranching enzyme, C-terminal
 IPR032792  Glycogen debranching enzyme, glucanotransferase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005978 glycogen biosynthetic process IEA
 biological_processGO:0005980 glycogen catabolic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004134 4-alpha-glucanotransferase activity IEA
 molecular_functionGO:0004135 amylo-alpha-1,6-glucosidase activity IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation
Glycogen breakdown (glycogenolysis)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000059391 gyg1b / glycogenin 1b / Gyg* / GYG1* / P46976* / Q9R062* / glycogenin* / glycogenin 1*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr