ENSDARG00000104069


Danio rerio

Features
Gene ID: ENSDARG00000104069
  
Biological name :rnf170
  
Synonyms : ring finger protein 170 / rnf170
  
Possible biological names infered from orthology : Gm45692 / Mus musculus ring finger protein 170 (Rnf170), transcript variant 3, mRNA. / Q8CBG9 / Q96K19
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 337215
Gene end: 343477
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132000
Ensembl peptide - ENSDARP00000149585
NCBI entrez gene - 406612     See in Manteia.
RefSeq - NM_214750
RefSeq Peptide - NP_999915
swissprot - F1QB65
ZFIN ID - ZDB-GENE-040426-2572
Ensembl - ENSDARG00000104069
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RNF170ENSGALG00000015386Gallus gallus
 Q96K19ENSG00000120925Homo sapiens
 Gm45692ENSMUSG00000109850Mus musculus
 Q8CBG9ENSMUSG00000013878Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:dkey-183n20.15ENSDARG0000009426530


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR010652  Domain of unknown function DUF1232
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR018957  Zinc finger, C3HC4 RING-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism dead , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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