ENSDARG00000104225


Danio rerio

Features
Gene ID: ENSDARG00000104225
  
Biological name :ndel1b
  
Synonyms : ndel1b / nudE neurodevelopment protein 1-like 1b / Q803Q2
  
Possible biological names infered from orthology : NDEL1 / Nuclear distribution protein nudE-like 1 / nudE neurodevelopment protein 1 like 1 / Q9ERR1 / Q9GZM8
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 48584684
Gene end: 48612078
  
Corresponding Affymetrix probe sets: Dr.7294.1.S1_at (Zebrafish Array)   NM_201307_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000148946
Ensembl peptide - ENSDARP00000140064
NCBI entrez gene - 333957     See in Manteia.
RefSeq - NM_201307
RefSeq Peptide - NP_958464
swissprot - B2GRS6
swissprot - Q803Q2
ZFIN ID - ZDB-GENE-030131-5889
Ensembl - ENSDARG00000104225
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NDEL1ENSGALG00000001163Gallus gallus
 NDEL1ENSG00000166579Homo sapiens
 Ndel1ENSMUSG00000018736Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ndel1a / nudE neurodevelopment protein 1-like 1a / NDEL1* / Q9GZM8* / Q9ERR1* / nudE neurodevelopment protein 1 like 1* / Nuclear distribution protein nudE-like 1 *ENSDARG0000001095379
nde1 / nudE neurodevelopment protein 1 / Q9CZA6* / Q9NXR1* / Nuclear distribution 1 *ENSDARG0000010390246


Protein motifs (from Interpro)
Interpro ID Name
 IPR006964  NUDE domain
 IPR033493  Nuclear distribution protein nudE-like 1
 IPR033494  NUDE family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000132 establishment of mitotic spindle orientation IBA
 biological_processGO:0007020 microtubule nucleation IBA
 biological_processGO:0007059 chromosome segregation IBA
 biological_processGO:0007100 mitotic centrosome separation IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0010975 regulation of neuron projection development IBA
 biological_processGO:0016477 cell migration IBA
 biological_processGO:0047496 vesicle transport along microtubule IBA
 biological_processGO:0051303 establishment of chromosome localization IBA
 biological_processGO:0051642 centrosome localization IBA
 biological_processGO:0060052 neurofilament cytoskeleton organization IEA
 biological_processGO:2000574 regulation of microtubule motor activity IEA
 cellular_componentGO:0000776 kinetochore IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005871 kinesin complex IBA
 cellular_componentGO:0005874 microtubule IEA
 molecular_functionGO:0008017 microtubule binding IBA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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