ENSDARG00000104500


Danio rerio

Features
Gene ID: ENSDARG00000104500
  
Biological name :fyco1a
  
Synonyms : fyco1a / FYVE and coiled-coil domain containing 1a
  
Possible biological names infered from orthology : FYCO1 / FYVE and coiled-coil domain containing 1 / FYVE and coiled-coil domain-containing protein 1 / Q8VDC1 / Q9BQS8
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 39963599
Gene end: 40043212
  
Corresponding Affymetrix probe sets: Dr.14946.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000134006
Ensembl peptide - ENSDARP00000138819
NCBI entrez gene - 565649     See in Manteia.
RefSeq - XM_009297090
RefSeq - XM_009297091
swissprot - A0A0R4IRZ3
swissprot - A0A0R4IIH4
ZFIN ID - ZDB-GENE-110411-276
Ensembl - ENSDARG00000104500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 FYCO1ENSGALG00000040212Gallus gallus
 FYCO1ENSG00000163820Homo sapiens
 Fyco1ENSMUSG00000025241Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
fyco1b / FYVE and coiled-coil domain containing 1b / FYCO1* / Q9BQS8* / FYVE and coiled-coil domain containing 1*ENSDARG0000007802240
eea1 / early endosome antigen 1 / Q15075* / Q8BL66*ENSDARG0000006286814


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR004012  RUN domain
 IPR009038  GOLD domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr