ENSMUSG00000025241


Mus musculus

Features
Gene ID: ENSMUSG00000025241
  
Biological name :Fyco1
  
Synonyms : Fyco1 / FYVE and coiled-coil domain-containing protein 1 / Q8VDC1
  
Possible biological names infered from orthology : FYVE and coiled-coil domain containing 1 / Q9BQS8
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: F4
Gene start: 123789500
Gene end: 123851899
  
Corresponding Affymetrix probe sets: 10597978 (MoGene1.0st)   1427177_at (Mouse Genome 430 2.0 Array)   1453424_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000081764
Ensembl peptide - ENSMUSP00000133222
Ensembl peptide - ENSMUSP00000139343
NCBI entrez gene - 17281     See in Manteia.
MGI - MGI:107277
RefSeq - XM_017313159
RefSeq - NM_001110253
RefSeq - NM_148925
RefSeq Peptide - NP_001103723
RefSeq Peptide - NP_683727
swissprot - Q8VDC1
swissprot - A0A140T8V9
Ensembl - ENSMUSG00000025241
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fyco1aENSDARG00000104500Danio rerio
 fyco1bENSDARG00000078022Danio rerio
 FYCO1ENSGALG00000040212Gallus gallus
 FYCO1ENSG00000163820Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Eea1 / Q8BL66 / Early endosome antigen 1 / Q15075*ENSMUSG0000003649915
Rufy4 / Q3TYX8 / RUN and FYVE domain-containing protein 4 / Q6ZNE9* / RUN and FYVE domain containing 4*ENSMUSG0000006181512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000306  FYVE zinc finger
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR004012  RUN domain
 IPR009038  GOLD domain
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017455  Zinc finger, FYVE-related
 IPR036598  GOLD domain superfamily
 IPR037213  RUN domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 biological_processGO:0072383 plus-end-directed vesicle transport along microtubule IBA
 biological_processGO:1901098 positive regulation of autophagosome maturation IBA
 cellular_componentGO:0005764 lysosome IBA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005770 late endosome IBA
 cellular_componentGO:0005776 autophagosome ISO
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051082 unfolded protein binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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