ENSDARG00000104669


Danio rerio

Features
Gene ID: ENSDARG00000104669
  
Biological name :slc35c1
  
Synonyms : slc35c1 / solute carrier family 35 (GDP-fucose transporter), member C1
  
Possible biological names infered from orthology : Q8BLX4 / Q96A29 / solute carrier family 35 member C1
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 72272918
Gene end: 72277342
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138906
Ensembl peptide - ENSDARP00000149581
NCBI entrez gene - 494047     See in Manteia.
RefSeq - NM_001008590
RefSeq Peptide - NP_001008590
swissprot - Q5PR94
ZFIN ID - ZDB-GENE-041212-11
Ensembl - ENSDARG00000104669
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC35C1ENSGALG00000008438Gallus gallus
 Q96A29ENSG00000181830Homo sapiens
 Q8BLX4ENSMUSG00000049922Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004853  Sugar phosphate transporter domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036085 GDP-fucose import into Golgi lumen IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005457 GDP-fucose transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
GDP-fucose biosynthesis
Transport of nucleotide sugars


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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