ENSDARG00000104945


Danio rerio

Features
Gene ID: ENSDARG00000104945
  
Biological name :sncb
  
Synonyms : sncb / synuclein, beta
  
Possible biological names infered from orthology : Beta-synuclein / Q16143 / Q91ZZ3
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 50770537
Gene end: 50804016
  
Corresponding Affymetrix probe sets: Dr.7855.1.A1_at (Zebrafish Array)   Dr.7855.2.S1_at (Zebrafish Array)   NM_200969_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135627
NCBI entrez gene - 393944     See in Manteia.
RefSeq - NM_200969
RefSeq Peptide - NP_957263
swissprot - Q7SX92
ZFIN ID - ZDB-GENE-040426-1615
Ensembl - ENSDARG00000104945
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNCBENSGALG00000021542Gallus gallus
 SNCBENSG00000074317Homo sapiens
 SncbENSMUSG00000034891Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sncgb / synuclein, gamma b (breast cancer-specific protein 1) / SNCG* / O76070* / synuclein gamma*ENSDARG0000010971539
sncga / synuclein, gamma a / SNCG* / Q9Z0F7* / O76070* / synuclein gamma*ENSDARG0000003442335


Protein motifs (from Interpro)
Interpro ID Name
 IPR001058  Synuclein
 IPR002461  Beta-synuclein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008345 larval locomotory behavior IMP
 biological_processGO:0071542 dopaminergic neuron differentiation IGI
 cellular_componentGO:0005737 cytoplasm IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr