ENSDARG00000109715


Danio rerio

Features
Gene ID: ENSDARG00000109715
  
Biological name :sncgb
  
Synonyms : sncgb / synuclein, gamma b (breast cancer-specific protein 1)
  
Possible biological names infered from orthology : O76070 / Q9Z0F7 / SNCG / synuclein gamma
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 25894539
Gene end: 25916530
  
Corresponding Affymetrix probe sets: Dr.14576.1.S1_at (Zebrafish Array)   Dr.14576.2.S1_at (Zebrafish Array)   Dr.14576.3.A1_at (Zebrafish Array)   Dr.25550.1.A1_at (Zebrafish Array)   NM_001020652_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000149780
NCBI entrez gene - 553679     See in Manteia.
RefSeq - NM_001020652
RefSeq Peptide - NP_001018488
ZFIN ID - ZDB-GENE-050522-235
Ensembl - ENSDARG00000109715
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SNCGENSGALG00000002015Gallus gallus
 SNCGENSG00000173267Homo sapiens
 SncgENSMUSG00000023064Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sncga / synuclein, gamma a / SNCG* / Q9Z0F7* / O76070* / synuclein gamma*ENSDARG0000003442362
sncb / synuclein, beta / Q16143*ENSDARG0000010494544


Protein motifs (from Interpro)
Interpro ID Name
 IPR001058  Synuclein


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000079 telencephalon telencephalon neuron amount , ameliorated
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 ZFA:0000101 diencephalon diencephalon neuron amount , ameliorated
Show

 ZFA:0009301 dopaminergic neuron dopaminergic neuron decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr