ENSDARG00000105210


Danio rerio

Features
Gene ID: ENSDARG00000105210
  
Biological name :etf1a
  
Synonyms : etf1a / eukaryotic translation termination factor 1a
  
Possible biological names infered from orthology : ETF1 / Eukaryotic peptide chain release factor subunit 1 / eukaryotic translation termination factor 1 / P62495 / Q8BWY3
  
Species: Danio rerio
  
Chr. number: 14
Strand: -1
Band:
Gene start: 2589465
Gene end: 2602445
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000138223
swissprot - A0A0R4IPP6
ZFIN ID - ZDB-GENE-080218-14
Ensembl - ENSDARG00000105210
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ETF1ENSGALG00000002262Gallus gallus
 ETF1ENSG00000120705Homo sapiens
 Etf1ENSMUSG00000024360Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
etf1b / eukaryotic translation termination factor 1b / ETF1* / Q8BWY3* / P62495* / eukaryotic translation termination factor 1* / Eukaryotic peptide chain release factor subunit 1 *ENSDARG0000004397688


Protein motifs (from Interpro)
Interpro ID Name
 IPR004403  Peptide chain release factor eRF1/aRF1
 IPR005140  eRF1 domain 1/Pelota-like
 IPR005141  eRF1 domain 2
 IPR005142  eRF1 domain 3
 IPR024049  Peptide Chain Release Factor eRF1/aRF1, N-terminal
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006415 translational termination IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003747 translation release factor activity IEA


Pathways (from Reactome)
Pathway description
Eukaryotic Translation Termination
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr