ENSGALG00000002262


Gallus gallus

Features
Gene ID: ENSGALG00000002262
  
Biological name :ETF1
  
Synonyms : ETF1 / eukaryotic translation termination factor 1
  
Possible biological names infered from orthology : Eukaryotic peptide chain release factor subunit 1 / P62495 / Q8BWY3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 2788559
Gene end: 2813123
  
Corresponding Affymetrix probe sets: Gga.6429.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003538
Ensembl peptide - ENSGALP00000063401
Ensembl peptide - ENSGALP00000061182
NCBI entrez gene - 416182     See in Manteia.
RefSeq - XM_414511
swissprot - E1BTM1
swissprot - A0A1L1RX26
swissprot - A0A1L1RQV2
Ensembl - ENSGALG00000002262
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 etf1aENSDARG00000105210Danio rerio
 etf1bENSDARG00000043976Danio rerio
 ETF1ENSG00000120705Homo sapiens
 Etf1ENSMUSG00000024360Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004403  Peptide chain release factor eRF1/aRF1
 IPR005140  eRF1 domain 1/Pelota-like
 IPR005141  eRF1 domain 2
 IPR005142  eRF1 domain 3
 IPR024049  Peptide Chain Release Factor eRF1/aRF1, N-terminal
 IPR029064  50S ribosomal protein L30e-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006415 translational termination IEA
 biological_processGO:0006479 protein methylation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0003747 translation release factor activity IEA
 molecular_functionGO:1990825 sequence-specific mRNA binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002262 ETF1 / eukaryotic translation termination factor 1 / P62495* / Q8BWY3* / Eukaryotic peptide chain release factor subunit 1 *  / complex
 ENSGALG00000039500 GSPT1 / GSPT2* / P15170* / Q149F3* / Q8IYD1* / Q8R050* / G1 to S phase transition 2* / G1 to S phase transition 1*  / complex






 

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contact: otassy@igbmc.fr