ENSGALG00000039500


Gallus gallus

Features
Gene ID: ENSGALG00000039500
  
Biological name :GSPT1
  
Synonyms : GSPT1
  
Possible biological names infered from orthology : G1 to S phase transition 1 / G1 to S phase transition 2 / GSPT2 / P15170 / Q149F3 / Q8IYD1 / Q8R050
  
Species: Gallus gallus
  
Chr. number: 14
Strand: -1
Band:
Gene start: 117740
Gene end: 143255
  
Corresponding Affymetrix probe sets: Gga.18312.1.A1_at (Chicken Array)   Gga.9336.1.S1_at (Chicken Array)   Gga.9336.2.S1_a_at (Chicken Array)   GgaAffx.11886.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000058108
Ensembl peptide - ENSGALP00000061390
NCBI entrez gene - 768522     See in Manteia.
RefSeq - NM_001135677
RefSeq - XM_015294247
RefSeq Peptide - NP_001129149
swissprot - A0A1L1RRF7
swissprot - A0A1D5PYQ3
Ensembl - ENSGALG00000039500
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gspt1ENSDARG00000031048Danio rerio
 gspt1lENSDARG00000098627Danio rerio
 GSPT1ENSG00000103342Homo sapiens
 GSPT2ENSG00000189369Homo sapiens
 Gspt1ENSMUSG00000062203Mus musculus
 Gspt2ENSMUSG00000071723Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HBS1L / HBS1 like translational GTPase / Q69ZS7* / Q9Y450* / HBS1-like protein *ENSGALG0000001396233


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004160  Translation elongation factor EFTu/EF1A, C-terminal
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR009818  Ataxin-2, C-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031157  Tr-type G domain, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000002262 ETF1 / eukaryotic translation termination factor 1 / P62495* / Q8BWY3* / Eukaryotic peptide chain release factor subunit 1 *  / complex






 

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contact: otassy@igbmc.fr