ENSGALG00000013962


Gallus gallus

Features
Gene ID: ENSGALG00000013962
  
Biological name :HBS1L
  
Synonyms : HBS1L / HBS1 like translational GTPase
  
Possible biological names infered from orthology : HBS1-like protein / Q69ZS7 / Q9Y450
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 55939197
Gene end: 56007426
  
Corresponding Affymetrix probe sets: GgaAffx.8873.1.S1_at (Chicken Array)   GgaAffx.8873.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022592
Ensembl peptide - ENSGALP00000055222
Ensembl peptide - ENSGALP00000043286
NCBI entrez gene - 421694     See in Manteia.
RefSeq - XM_001234090
RefSeq - XM_015284167
swissprot - E1BW59
swissprot - A0A1D5PQQ5
swissprot - Q5F369
Ensembl - ENSGALG00000013962
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hbs1lENSDARG00000036778Danio rerio
 HBS1LENSG00000112339Homo sapiens
 Hbs1lENSMUSG00000019977Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GSPT1 / GSPT2* / P15170* / Q149F3* / Q8IYD1* / Q8R050* / G1 to S phase transition 2* / G1 to S phase transition 1*ENSGALG0000003950028


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004160  Translation elongation factor EFTu/EF1A, C-terminal
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR009001  Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal
 IPR015033  HBS1-like protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IBA
 cellular_componentGO:0005622 intracellular IBA
 molecular_functionGO:0003924 GTPase activity IBA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
mRNA decay by 3 to 5 exoribonuclease


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000014670 TTC37 / tetratricopeptide repeat domain 37 / Q6PGP7*  / complex






 

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contact: otassy@igbmc.fr