ENSDARG00000105237


Danio rerio

Features
Gene ID: ENSDARG00000105237
  
Biological name :mcc
  
Synonyms : mcc / mutated in colorectal cancers
  
Possible biological names infered from orthology : P23508
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 1668478
Gene end: 1827575
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000139720
NCBI entrez gene - 100537329     See in Manteia.
RefSeq - XM_021476719
swissprot - A0A0R4IV76
ZFIN ID - ZDB-GENE-141210-1
Ensembl - ENSDARG00000105237
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MCCENSGALG00000000208Gallus gallus
 MCCENSG00000171444Homo sapiens
 MccENSMUSG00000071856Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ushbp1 / Usher syndrome 1C binding protein 1ENSDARG0000008907116


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR019536  Usher syndrome type-1C protein-binding protein 1, PDZ domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0060027 convergent extension involved in gastrulation IGI
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000016 ectoderm ectoderm cell shape , abnormal
ectoderm cell orientation ectoderm , abnormal
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 ZFA:0000106 extension extension decreased length , abnormal
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 ZFA:0000107 eye eye decreased size , abnormal
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 ZFA:0000135 notochord notochord cell shape , abnormal
notochord cell orientation notochord , abnormal
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 ZFA:0000155 somite somite condensed , abnormal
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 ZFA:0001094 whole organism whole organism decreased length , abnormal
whole organism curved ventral , abnormal
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 ZFA:0001114 head head decreased size , abnormal
head malformed , abnormal
head cell death increased process quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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