ENSDARG00000105255


Danio rerio

Features
Gene ID: ENSDARG00000105255
  
Biological name :zbtb4
  
Synonyms : zbtb4 / zinc finger and BTB domain containing 4
  
Possible biological names infered from orthology : Q5F293 / Q9P1Z0
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 22528750
Gene end: 22540943
  
Corresponding Affymetrix probe sets: Dr.16329.1.A1_at (Zebrafish Array)   XM_001339110_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000137838
NCBI entrez gene - 798710     See in Manteia.
RefSeq - XM_001339110
swissprot - A0A0R4INF0
ZFIN ID - ZDB-GENE-100318-5
Ensembl - ENSDARG00000105255
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ZBTB4ENSG00000174282Homo sapiens
 Zbtb4ENSMUSG00000018750Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
zbtb38 / zinc finger and BTB domain containing 38 / Q8NAP3*ENSDARG0000010060716
zbtb33 / zinc finger and BTB domain containing 33 / Q86T24* / Q8BN78*ENSDARG000000714677
zbtb14 / zinc finger and BTB domain containing 14 / O43829*ENSDARG000000982734
zbtb21 / zinc finger and BTB domain containing 21 / Q9ULJ3*ENSDARG000000432851


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IMP
 biological_processGO:0009952 anterior/posterior pattern specification IDA
 biological_processGO:0009953 dorsal/ventral pattern formation IMP
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0060030 dorsal convergence IMP
 biological_processGO:0060031 mediolateral intercalation IMP
 cellular_componentGO:0005634 nucleus IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism wholly dorsalized , abnormal
whole organism decreased amount , abnormal
Show

 ZFA:0001117 post-vent region post-vent region decreased size , abnormal
post-vent region curved dorsal , abnormal
post-vent region absent , abnormal
Show

 ZFA:0005041 anterior lateral plate mesoderm anterior lateral plate mesoderm decreased amount , abnormal
Show

 ZFA:0005042 posterior lateral plate mesoderm posterior lateral plate mesoderm decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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