ENSDARG00000110792


Danio rerio

Features
Gene ID: ENSDARG00000110792
  
Biological name :AL772241.1
  
Synonyms : AL772241.1
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 13271458
Gene end: 13280481
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148022
NCBI entrez gene - 110439423     See in Manteia.
swissprot - Q7M558
Ensembl - ENSDARG00000110792
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX539310.1ENSDARG00000116510100
CABZ01084081.1ENSDARG0000011152222
AL935126.2ENSDARG0000011130922
BX927362.2ENSDARG0000011291821
CR385053.3ENSDARG0000011415821
AL928650.4ENSDARG0000011385820
BX324227.2ENSDARG0000010974319
BX324227.3ENSDARG0000011094919
BX537305.1ENSDARG0000011383419
BX927253.3ENSDARG0000011431719
pif1 / PIF1 5-to-3 DNA helicase homolog (S. cerevisiae) / Q80SX8* / Q9H611* / PIF1 5-to-3 DNA helicase* / Mus musculus PIF1 5-to-3 DNA helicase (Pif1), transcript variant 2, mRNA.*ENSDARG000000202894


Protein motifs (from Interpro)
Interpro ID Name
 IPR003323  OTU domain
 IPR003593  AAA+ ATPase domain
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR006928  Herpesvirus large tegument protein, USP domain
 IPR010285  DNA helicase Pif1-like
 IPR025476  Helitron helicase-like domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003678 DNA helicase activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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