ENSDARG00000113858


Danio rerio

Features
Gene ID: ENSDARG00000113858
  
Biological name :AL928650.4
  
Synonyms : AL928650.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 8579197
Gene end: 8586066
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000147686
swissprot - Q7M562
Ensembl - ENSDARG00000113858
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BX324227.3ENSDARG0000011094991
BX324227.2ENSDARG0000010974391
BX537305.1ENSDARG0000011383488
BX927253.3ENSDARG0000011431788
CR385053.3ENSDARG0000011415851
CABZ01084081.1ENSDARG0000011152251
AL935126.2ENSDARG0000011130951
BX927362.2ENSDARG0000011291849
BX539310.1ENSDARG0000011651026
AL772241.1ENSDARG0000011079226
pif1 / PIF1 5-to-3 DNA helicase homolog (S. cerevisiae) / Q80SX8* / Q9H611* / PIF1 5-to-3 DNA helicase* / Mus musculus PIF1 5-to-3 DNA helicase (Pif1), transcript variant 2, mRNA.*ENSDARG000000202896


Protein motifs (from Interpro)
Interpro ID Name
 IPR003840  DNA helicase
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR010285  DNA helicase Pif1-like
 IPR025476  Helitron helicase-like domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000723 telomere maintenance IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0032508 DNA duplex unwinding IEA
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003678 DNA helicase activity IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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