ENSG00000006047


Homo sapiens

Features
Gene ID: ENSG00000006047
  
Biological name :YBX2
  
Synonyms : Q9Y2T7 / Y-box binding protein 2 / YBX2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p13.1
Gene start: 7288252
Gene end: 7294615
  
Corresponding Affymetrix probe sets: 219704_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000007699
Ensembl peptide - ENSP00000459587
NCBI entrez gene - 51087     See in Manteia.
OMIM - 611447
RefSeq - XM_017024713
RefSeq - NM_015982
RefSeq Peptide - NP_057066
swissprot - Q9Y2T7
swissprot - I3L2D6
Ensembl - ENSG00000006047
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Ybx2ENSMUSG00000018554Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
YBX3 / P16989 / Y-box binding protein 3ENSG0000006013845
YBX1 / P67809 / Y-box binding protein 1ENSG0000006597840


Protein motifs (from Interpro)
Interpro ID Name
 IPR002059  Cold-shock protein, DNA-binding
 IPR011129  Cold shock domain
 IPR012340  Nucleic acid-binding, OB-fold
 IPR019844  Cold-shock conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0007283 spermatogenesis TAS
 biological_processGO:0009386 translational attenuation TAS
 biological_processGO:0048599 oocyte development IEA
 cellular_componentGO:0001650 fibrillar center IDA
 cellular_componentGO:0005634 nucleus TAS
 cellular_componentGO:0005737 cytoplasm TAS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr