ENSG00000006576


Homo sapiens

Features
Gene ID: ENSG00000006576
  
Biological name :PHTF2
  
Synonyms : PHTF2 / putative homeodomain transcription factor 2 / Q8N3S3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q11.23
Gene start: 77798792
Gene end: 77957503
  
Corresponding Affymetrix probe sets: 1554780_a_at (Human Genome U133 Plus 2.0 Array)   1554822_at (Human Genome U133 Plus 2.0 Array)   209780_at (Human Genome U133 Plus 2.0 Array)   215286_s_at (Human Genome U133 Plus 2.0 Array)   217097_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000403620
Ensembl peptide - ENSP00000248550
Ensembl peptide - ENSP00000275575
Ensembl peptide - ENSP00000307699
Ensembl peptide - ENSP00000387355
Ensembl peptide - ENSP00000408035
Ensembl peptide - ENSP00000400958
Ensembl peptide - ENSP00000403042
NCBI entrez gene - 57157     See in Manteia.
OMIM - 616785
RefSeq - XM_017012459
RefSeq - NM_001127357
RefSeq - NM_001127358
RefSeq - NM_001127359
RefSeq - NM_001127360
RefSeq - NM_020432
RefSeq - XM_005250509
RefSeq - XM_006716063
RefSeq - XM_011516422
RefSeq - XM_011516423
RefSeq - XM_011516424
RefSeq - XM_017012458
RefSeq - XM_005250508
RefSeq Peptide - NP_001120830
RefSeq Peptide - NP_001120831
RefSeq Peptide - NP_001120832
RefSeq Peptide - NP_065165
RefSeq Peptide - NP_001120829
swissprot - Q8N3S3
Ensembl - ENSG00000006576
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phtf2ENSDARG00000102123Danio rerio
 PHTF2ENSGALG00000008335Gallus gallus
 Phtf2ENSMUSG00000039987Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHTF1 / Q9UMS5 / putative homeodomain transcription factor 1ENSG0000011679355


Protein motifs (from Interpro)
Interpro ID Name
 IPR021980  Transcription factor homeodomain, male germ-cell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr