ENSMUSG00000039987


Mus musculus

Features
Gene ID: ENSMUSG00000039987
  
Biological name :Phtf2
  
Synonyms : Phtf2 / putative homeodomain transcription factor 2
  
Possible biological names infered from orthology : Q8N3S3
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: A3
Gene start: 20758663
Gene end: 20882124
  
Corresponding Affymetrix probe sets: 10528238 (MoGene1.0st)   1437067_at (Mouse Genome 430 2.0 Array)   1437637_at (Mouse Genome 430 2.0 Array)   1444559_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120624
Ensembl peptide - ENSMUSP00000114087
Ensembl peptide - ENSMUSP00000118028
Ensembl peptide - ENSMUSP00000120222
NCBI entrez gene - 68770     See in Manteia.
MGI - MGI:1916020
RefSeq - XM_006535803
RefSeq - NM_172992
RefSeq - XM_006535801
RefSeq Peptide - NP_766580
swissprot - D6RJJ1
swissprot - A0A0R4J1Q1
swissprot - F6W0Y3
swissprot - F6X6S4
Ensembl - ENSMUSG00000039987
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 phtf2ENSDARG00000102123Danio rerio
 PHTF2ENSGALG00000008335Gallus gallus
 PHTF2ENSG00000006576Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Phtf1 / Q9QZ09 / Putative homeodomain transcription factor 1 / Q9UMS5*ENSMUSG0000005838855


Protein motifs (from Interpro)
Interpro ID Name
 IPR021980  Transcription factor homeodomain, male germ-cell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0003179 decreased platelet count "fewer than the normal numbers of the non-nucleated cells found in the blood and involved in blood coagulation " [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, hdene:Howard Dene , Mouse Genome Informatics Curator, J:93052]
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Allelic Composition: Padi6tm1b(KOMP)Wtsi/Padi6tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Padi6tm1b(KOMP)Wtsi/Ucd

 MP:0005628 decreased circulating potassium level "less than the normal concentration in the blood of this alkaline metallic element, the most abundant intracellular ion; anomalies in the extracellular (circulating) concentration have important implications for the function of excitable tissues, such as nerve and muscle" [RGD:Rat Genome Database submission]
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Allelic Composition: Padi6tm1b(KOMP)Wtsi/Padi6tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Padi6tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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