ENSMUSG00000058388


Mus musculus

Features
Gene ID: ENSMUSG00000058388
  
Biological name :Phtf1
  
Synonyms : Phtf1 / Putative homeodomain transcription factor 1 / Q9QZ09
  
Possible biological names infered from orthology : Q9UMS5
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F2.2
Gene start: 103968110
Gene end: 104024598
  
Corresponding Affymetrix probe sets: 10495012 (MoGene1.0st)   1449148_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000116193
Ensembl peptide - ENSMUSP00000114722
Ensembl peptide - ENSMUSP00000118281
Ensembl peptide - ENSMUSP00000121036
Ensembl peptide - ENSMUSP00000058137
Ensembl peptide - ENSMUSP00000066607
Ensembl peptide - ENSMUSP00000088184
Ensembl peptide - ENSMUSP00000113973
NCBI entrez gene - 18685     See in Manteia.
MGI - MGI:1332671
RefSeq - XM_017319484
RefSeq - NM_001163467
RefSeq - NM_001163468
RefSeq - NM_001163469
RefSeq - NM_013629
RefSeq - XM_006501125
RefSeq - XM_006501126
RefSeq - XM_006501127
RefSeq - XM_011240035
RefSeq - XM_017319481
RefSeq - XM_017319483
RefSeq Peptide - NP_001156939
RefSeq Peptide - NP_001156940
RefSeq Peptide - NP_001156941
RefSeq Peptide - NP_038657
swissprot - Q8C2F6
swissprot - Q5IBN5
swissprot - D3YTP5
swissprot - Q9QZ09
swissprot - D6RIJ6
swissprot - D3Z6K3
swissprot - Q80YS3
Ensembl - ENSMUSG00000058388
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:175264ENSDARG00000057708Danio rerio
 PHTF1ENSGALG00000001845Gallus gallus
 PHTF1ENSG00000116793Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Phtf2 / putative homeodomain transcription factor 2 / Q8N3S3*ENSMUSG0000003998754


Protein motifs (from Interpro)
Interpro ID Name
 IPR021980  Transcription factor homeodomain, male germ-cell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005801 cis-Golgi network IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr