ENSG00000116793


Homo sapiens

Features
Gene ID: ENSG00000116793
  
Biological name :PHTF1
  
Synonyms : PHTF1 / putative homeodomain transcription factor 1 / Q9UMS5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p13.2
Gene start: 113696831
Gene end: 113759489
  
Corresponding Affymetrix probe sets: 205702_at (Human Genome U133 Plus 2.0 Array)   210191_s_at (Human Genome U133 Plus 2.0 Array)   215285_s_at (Human Genome U133 Plus 2.0 Array)   235844_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000416810
Ensembl peptide - ENSP00000377025
Ensembl peptide - ENSP00000404690
Ensembl peptide - ENSP00000350428
Ensembl peptide - ENSP00000358611
Ensembl peptide - ENSP00000358613
Ensembl peptide - ENSP00000358617
NCBI entrez gene - 10745     See in Manteia.
OMIM - 604950
RefSeq - NM_001323046
RefSeq - NM_001323041
RefSeq - NM_001323042
RefSeq - NM_001323043
RefSeq - NM_001323044
RefSeq - NM_001323045
RefSeq - NM_001323047
RefSeq - NM_001323048
RefSeq - NM_001323049
RefSeq - NM_001323050
RefSeq - NM_001323051
RefSeq - NM_001323052
RefSeq - NM_001323053
RefSeq - NM_006608
RefSeq Peptide - NP_001309980
RefSeq Peptide - NP_001309981
RefSeq Peptide - NP_001309982
RefSeq Peptide - NP_006599
RefSeq Peptide - NP_001309972
RefSeq Peptide - NP_001309973
RefSeq Peptide - NP_001309970
RefSeq Peptide - NP_001309974
RefSeq Peptide - NP_001309975
RefSeq Peptide - NP_001309976
RefSeq Peptide - NP_001309977
RefSeq Peptide - NP_001309978
RefSeq Peptide - NP_001309971
RefSeq Peptide - NP_001309979
swissprot - Q5TCQ3
swissprot - Q9UMS5
swissprot - H0Y825
swissprot - F6T5D1
swissprot - Q5TCQ5
Ensembl - ENSG00000116793
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:175264ENSDARG00000057708Danio rerio
 PHTF1ENSGALG00000001845Gallus gallus
 Phtf1ENSMUSG00000058388Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHTF2 / Q8N3S3 / putative homeodomain transcription factor 2ENSG0000000657654


Protein motifs (from Interpro)
Interpro ID Name
 IPR021980  Transcription factor homeodomain, male germ-cell


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005801 cis-Golgi network IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr