ENSG00000011260


Homo sapiens

Features
Gene ID: ENSG00000011260
  
Biological name :UTP18
  
Synonyms : Q9Y5J1 / UTP18 / UTP18, small subunit processome component
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q21.33
Gene start: 51260528
Gene end: 51297936
  
Corresponding Affymetrix probe sets: 203721_s_at (Human Genome U133 Plus 2.0 Array)   222038_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000464194
Ensembl peptide - ENSP00000463499
Ensembl peptide - ENSP00000464095
Ensembl peptide - ENSP00000225298
Ensembl peptide - ENSP00000441335
Ensembl peptide - ENSP00000462614
NCBI entrez gene - 51096     See in Manteia.
OMIM - 612816
RefSeq - XM_011524870
RefSeq - NM_016001
RefSeq - XM_006721930
RefSeq Peptide - NP_057085
swissprot - J3QRG0
swissprot - F6VJE8
swissprot - J3QR85
swissprot - Q9Y5J1
swissprot - J3KSR7
swissprot - J3QLD6
Ensembl - ENSG00000011260
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp18ENSDARG00000102618Danio rerio
 UTP18ENSGALG00000002985Gallus gallus
 Utp18ENSMUSG00000054079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
rRNA modification in the nucleus and cytosol
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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