ENSMUSG00000054079


Mus musculus

Features
Gene ID: ENSMUSG00000054079
  
Biological name :Utp18
  
Synonyms : Q5SSI6 / Utp18 / UTP18 small subunit processome component
  
Possible biological names infered from orthology : Q9Y5J1
  
Species: Mus musculus
  
Chr. number: 11
Strand: -1
Band: D
Gene start: 93859243
Gene end: 93885766
  
Corresponding Affymetrix probe sets: 10389842 (MoGene1.0st)   1447266_at (Mouse Genome 430 2.0 Array)   1454817_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000068103
NCBI entrez gene - 217109     See in Manteia.
MGI - MGI:1923402
RefSeq - NM_001013375
RefSeq Peptide - NP_001013393
swissprot - Q3U3Q3
swissprot - Q5SSI6
Ensembl - ENSMUSG00000054079
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp18ENSDARG00000102618Danio rerio
 UTP18ENSGALG00000002985Gallus gallus
 UTP18ENSG00000011260Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 biological_processGO:0006364 rRNA processing IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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