ENSGALG00000002985


Gallus gallus

Features
Gene ID: ENSGALG00000002985
  
Biological name :UTP18
  
Synonyms : UTP18 / UTP18, small subunit processome component
  
Possible biological names infered from orthology : Q5SSI6 / Q9Y5J1
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 5152628
Gene end: 5169680
  
Corresponding Affymetrix probe sets: Gga.12637.1.S1_at (Chicken Array)   Gga.12637.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004714
Ensembl peptide - ENSGALP00000062862
Ensembl peptide - ENSGALP00000045017
NCBI entrez gene - 417388     See in Manteia.
RefSeq - XM_003642314
swissprot - E1C7Z0
swissprot - A0A1L1RVK6
swissprot - A0A1D5NXC2
Ensembl - ENSGALG00000002985
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 utp18ENSDARG00000102618Danio rerio
 UTP18ENSG00000011260Homo sapiens
 Utp18ENSMUSG00000054079Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0034388 Pwp2p-containing subcomplex of 90S preribosome IBA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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