ENSG00000036473


Homo sapiens

Features
Gene ID: ENSG00000036473
  
Biological name :OTC
  
Synonyms : ornithine carbamoyltransferase / OTC / P00480
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: 1
Band: p11.4
Gene start: 38352545
Gene end: 38421450
  
Corresponding Affymetrix probe sets: 207200_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000039007
Ensembl peptide - ENSP00000496606
NCBI entrez gene - 5009     See in Manteia.
OMIM - 300461
RefSeq - XM_017029556
RefSeq - NM_000531
RefSeq Peptide - NP_000522
swissprot - P00480
Ensembl - ENSG00000036473
  
Related genetic diseases (OMIM): 311250 - Ornithine transcarbamylase deficiency, 311250
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 otcENSDARG00000062147Danio rerio
 OTCENSGALG00000016254Gallus gallus
 OtcENSMUSG00000031173Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002292  Ornithine/putrescine carbamoyltransferase
 IPR006130  Aspartate/ornithine carbamoyltransferase
 IPR006131  Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain
 IPR006132  Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding
 IPR036901  Aspartate/ornithine carbamoyltransferase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000050 urea cycle TAS
 biological_processGO:0001889 liver development IEA
 biological_processGO:0006520 cellular amino acid metabolic process IEA
 biological_processGO:0006526 arginine biosynthetic process IEA
 biological_processGO:0006591 ornithine metabolic process IEA
 biological_processGO:0006593 ornithine catabolic process IDA
 biological_processGO:0006626 protein targeting to mitochondrion TAS
 biological_processGO:0007494 midgut development IEA
 biological_processGO:0008652 cellular amino acid biosynthetic process IEA
 biological_processGO:0010043 response to zinc ion IEA
 biological_processGO:0019240 citrulline biosynthetic process IDA
 biological_processGO:0031667 response to nutrient levels IEA
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0042450 arginine biosynthetic process via ornithine IBA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0055081 anion homeostasis IEA
 biological_processGO:0070207 protein homotrimerization IEA
 biological_processGO:0070781 response to biotin IEA
 biological_processGO:0097272 ammonia homeostasis IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0004585 ornithine carbamoyltransferase activity EXP
 molecular_functionGO:0005543 phospholipid binding IEA
 molecular_functionGO:0016597 amino acid binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016743 carboxyl- or carbamoyltransferase activity IEA
 molecular_functionGO:0042301 phosphate ion binding IEA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
Urea cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000737 Irritability 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001259 Coma 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001297 Stroke 
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 HP:0001399 Hepatic failure 
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 HP:0001419 X-linked recessive inheritance "A mode of inheritance that is observed for recessive traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked recessive disorders manifest in males (who have one copy of the X chromosome and are thus hemizygotes), but generally not in female heterozygotes who have one mutant and one normal allele." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001950 Respiratory alkalosis 
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 HP:0001951 Episodic ammonia intoxication 
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 HP:0001987 Hyperammonemia 
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 HP:0002013 Vomiting 
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 HP:0002021 Pyloric stenosis 
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 HP:0002038 Protein avoidance 
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 HP:0002131 Ataxia, episodic 
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 HP:0002181 Cerebral edema "Abnormal accumulation of fluid in the brain." [HPO:curators]
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 HP:0003217 High plasma glutamine 
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 HP:0003355 Abnormal urinary amino-acid findings 
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 HP:0003572 Low plasma citrulline 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000036473 OTC / P00480 / ornithine carbamoyltransferase  / complex
 ENSG00000105819 PMPCB / O75439 / peptidase, mitochondrial processing beta subunit  / reaction






 

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