ENSG00000055917


Homo sapiens

Features
Gene ID: ENSG00000055917
  
Biological name :PUM2
  
Synonyms : PUM2 / pumilio RNA binding family member 2 / Q8TB72
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p24.1
Gene start: 20248691
Gene end: 20352234
  
Corresponding Affymetrix probe sets: 201493_s_at (Human Genome U133 Plus 2.0 Array)   216221_s_at (Human Genome U133 Plus 2.0 Array)   235995_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000395098
Ensembl peptide - ENSP00000387399
Ensembl peptide - ENSP00000396727
Ensembl peptide - ENSP00000413515
Ensembl peptide - ENSP00000409905
Ensembl peptide - ENSP00000408384
Ensembl peptide - ENSP00000326746
Ensembl peptide - ENSP00000338173
Ensembl peptide - ENSP00000354370
Ensembl peptide - ENSP00000385992
NCBI entrez gene - 23369     See in Manteia.
OMIM - 607205
RefSeq - XM_017003715
RefSeq - XM_006711973
RefSeq - XM_006711974
RefSeq - XM_006711975
RefSeq - XM_011532719
RefSeq - XM_011532720
RefSeq - XM_011532721
RefSeq - XM_011532723
RefSeq - XM_017003701
RefSeq - XM_017003702
RefSeq - XM_017003703
RefSeq - XM_017003704
RefSeq - XM_017003705
RefSeq - XM_017003706
RefSeq - XM_017003707
RefSeq - XM_017003708
RefSeq - XM_017003709
RefSeq - XM_017003710
RefSeq - XM_017003711
RefSeq - XM_017003712
RefSeq - XM_017003713
RefSeq - XM_017003714
RefSeq - NM_001282752
RefSeq - NM_001282790
RefSeq - NM_001282791
RefSeq - NM_001352917
RefSeq - NM_001352918
RefSeq - NM_001352919
RefSeq - NM_001352920
RefSeq - NM_001352923
RefSeq - NM_001352925
RefSeq - NM_001352926
RefSeq - NM_001352927
RefSeq - NM_001352928
RefSeq - NM_001352929
RefSeq - NM_015317
RefSeq - XM_005262607
RefSeq - XM_005262609
RefSeq - XM_005262610
RefSeq Peptide - NP_001269719
RefSeq Peptide - NP_001339854
RefSeq Peptide - NP_001339855
RefSeq Peptide - NP_001339856
RefSeq Peptide - NP_001339857
RefSeq Peptide - NP_001339858
RefSeq Peptide - NP_056132
RefSeq Peptide - NP_001269681
RefSeq Peptide - NP_001269720
RefSeq Peptide - NP_001339846
RefSeq Peptide - NP_001339847
RefSeq Peptide - NP_001339848
RefSeq Peptide - NP_001339849
RefSeq Peptide - NP_001339852
swissprot - C9JE24
swissprot - A0A0C4DG68
swissprot - F2Z366
swissprot - F8WD57
swissprot - Q8TB72
swissprot - A0A0A0MR59
swissprot - C9JW01
Ensembl - ENSG00000055917
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 pum2ENSDARG00000061040Danio rerio
 PUM2ENSGALG00000016481Gallus gallus
 Pum2ENSMUSG00000020594Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PUM1 / Q14671 / pumilio RNA binding family member 1ENSG0000013464478


Protein motifs (from Interpro)
Interpro ID Name
 IPR001313  Pumilio RNA-binding repeat
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR033133  Pumilio homology domain
 IPR033712  Pumilio, RNA binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006417 regulation of translation IEA
 biological_processGO:0010608 posttranscriptional regulation of gene expression IDA
 biological_processGO:0034063 stress granule assembly IEA
 biological_processGO:0035196 production of miRNAs involved in gene silencing by miRNA IMP
 biological_processGO:0043488 regulation of mRNA stability IDA
 biological_processGO:0051983 regulation of chromosome segregation IDA
 biological_processGO:0060964 regulation of gene silencing by miRNA TAS
 biological_processGO:1900246 positive regulation of RIG-I signaling pathway IDA
 biological_processGO:2000637 positive regulation of gene silencing by miRNA IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010494 cytoplasmic stress granule ISS
 cellular_componentGO:0031965 nuclear membrane IDA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0003723 RNA binding IDA
 molecular_functionGO:0003730 mRNA 3"-UTR binding IDA
 molecular_functionGO:0005488 binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0035198 miRNA binding IDA


Pathways (from Reactome)
Pathway description
Neddylation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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