ENSG00000056487


Homo sapiens

Features
Gene ID: ENSG00000056487
  
Biological name :PHF21B
  
Synonyms : PHD finger protein 21B / PHF21B / Q96EK2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: -1
Band: q13.31
Gene start: 44881162
Gene end: 45009999
  
Corresponding Affymetrix probe sets: 1560091_a_at (Human Genome U133 Plus 2.0 Array)   1562309_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000324403
Ensembl peptide - ENSP00000487086
Ensembl peptide - ENSP00000401294
Ensembl peptide - ENSP00000401091
Ensembl peptide - ENSP00000385053
Ensembl peptide - ENSP00000379410
NCBI entrez gene - 112885     See in Manteia.
OMIM - 616727
RefSeq - XM_006724122
RefSeq - NM_001135862
RefSeq - NM_001242450
RefSeq - NM_001284296
RefSeq - NM_138415
RefSeq Peptide - NP_001271225
RefSeq Peptide - NP_612424
RefSeq Peptide - NP_001129334
RefSeq Peptide - NP_001229379
swissprot - A0A0S2Z665
swissprot - B1AHC5
swissprot - B0QYW2
swissprot - A0A0S2Z6R3
swissprot - Q96EK2
swissprot - B1AHC6
Ensembl - ENSG00000056487
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF21BENSDARG00000109502Danio rerio
 PHF21BENSGALG00000014218Gallus gallus
 Phf21bENSMUSG00000016624Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHF21A / Q96BD5 / PHD finger protein 21AENSG0000013536534


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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