ENSGALG00000014218


Gallus gallus

Features
Gene ID: ENSGALG00000014218
  
Biological name :PHF21B
  
Synonyms : PHD finger protein 21B / PHF21B
  
Possible biological names infered from orthology : Q8C966 / Q96EK2
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 69994919
Gene end: 70038449
  
Corresponding Affymetrix probe sets: GgaAffx.9015.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000022952
Ensembl peptide - ENSGALP00000057006
Ensembl peptide - ENSGALP00000046400
Ensembl peptide - ENSGALP00000046235
NCBI entrez gene - 427935     See in Manteia.
RefSeq - XM_015291043
swissprot - A0A1D5PVN1
swissprot - A0A1D5P168
swissprot - A0A1D5P0Q7
swissprot - F1NX82
Ensembl - ENSGALG00000014218
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF21BENSDARG00000109502Danio rerio
 PHF21BENSG00000056487Homo sapiens
 Phf21bENSMUSG00000016624Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PHF21A / PHD finger protein 21A / Q96BD5* / PHD finger protein 21A isoform 4 *ENSGALG0000000840332


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr