ENSMUSG00000016624


Mus musculus

Features
Gene ID: ENSMUSG00000016624
  
Biological name :Phf21b
  
Synonyms : PHD finger protein 21B / Phf21b / Q8C966
  
Possible biological names infered from orthology : Q96EK2
  
Species: Mus musculus
  
Chr. number: 15
Strand: -1
Band: E2
Gene start: 84785381
Gene end: 84856049
  
Corresponding Affymetrix probe sets: 10431154 (MoGene1.0st)   1454999_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000016768
Ensembl peptide - ENSMUSP00000124941
Ensembl peptide - ENSMUSP00000125355
NCBI entrez gene - 271305     See in Manteia.
MGI - MGI:2443812
RefSeq - XM_017316656
RefSeq - NM_001081166
RefSeq - NM_001356573
RefSeq - XM_006521033
RefSeq - XM_006521034
RefSeq Peptide - NP_001343502
RefSeq Peptide - NP_001074635
swissprot - F8WGM2
swissprot - Q8C966
swissprot - E9PVV0
Ensembl - ENSMUSG00000016624
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PHF21BENSDARG00000109502Danio rerio
 PHF21BENSGALG00000014218Gallus gallus
 PHF21BENSG00000056487Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Phf21a / PHD finger protein 21A isoform 4 / Q96BD5* / PHD finger protein 21A*ENSMUSG0000005831836


Protein motifs (from Interpro)
Interpro ID Name
 IPR001965  Zinc finger, PHD-type
 IPR011011  Zinc finger, FYVE/PHD-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR019787  Zinc finger, PHD-finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003682 chromatin binding IBA
 molecular_functionGO:0003712 transcription coregulator activity IBA
 molecular_functionGO:0042393 histone binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr