ENSG00000061936


Homo sapiens

Features
Gene ID: ENSG00000061936
  
Biological name :SFSWAP
  
Synonyms : Q12872 / SFSWAP / splicing factor SWAP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: 1
Band: q24.33
Gene start: 131711081
Gene end: 131799737
  
Corresponding Affymetrix probe sets: 202773_s_at (Human Genome U133 Plus 2.0 Array)   202774_s_at (Human Genome U133 Plus 2.0 Array)   202775_s_at (Human Genome U133 Plus 2.0 Array)   240078_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000261674
Ensembl peptide - ENSP00000437738
Ensembl peptide - ENSP00000439957
Ensembl peptide - ENSP00000445832
NCBI entrez gene - 6433     See in Manteia.
OMIM - 601945
RefSeq - XM_017019799
RefSeq - NM_004592
RefSeq - XM_011538653
RefSeq - XM_011538654
RefSeq - XM_011538655
RefSeq - XM_017019798
RefSeq - NM_001261411
RefSeq Peptide - NP_001248340
RefSeq Peptide - NP_004583
swissprot - H0YFR9
swissprot - Q12872
swissprot - F5H1A5
Ensembl - ENSG00000061936
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sfswapENSDARG00000005980Danio rerio
 SFSWAPENSGALG00000002487Gallus gallus
 Q3USH5ENSMUSG00000029439Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR019147  Suppressor of white apricot N-terminal domain
 IPR035967  SWAP/Surp superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000380 alternative mRNA splicing, via spliceosome IEA
 biological_processGO:0000395 mRNA 5"-splice site recognition IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome ISS
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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