ENSG00000075856


Homo sapiens

Features
Gene ID: ENSG00000075856
  
Biological name :SART3
  
Synonyms : Q15020 / SART3 / squamous cell carcinoma antigen recognized by T cells 3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q23.3
Gene start: 108522580
Gene end: 108561400
  
Corresponding Affymetrix probe sets: 1554276_at (Human Genome U133 Plus 2.0 Array)   200069_at (Human Genome U133 Plus 2.0 Array)   209127_s_at (Human Genome U133 Plus 2.0 Array)   209128_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000449602
Ensembl peptide - ENSP00000449743
Ensembl peptide - ENSP00000228284
Ensembl peptide - ENSP00000414453
Ensembl peptide - ENSP00000446577
Ensembl peptide - ENSP00000447324
Ensembl peptide - ENSP00000447875
Ensembl peptide - ENSP00000448554
Ensembl peptide - ENSP00000449386
NCBI entrez gene - 9733     See in Manteia.
OMIM - 611684
RefSeq - XM_011539026
RefSeq - NM_014706
RefSeq - XM_005269241
RefSeq Peptide - NP_055521
swissprot - H0YHU8
swissprot - F8VV04
swissprot - F8W667
swissprot - Q15020
swissprot - F8VVK9
swissprot - F8VZM2
Ensembl - ENSG00000075856
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sart3ENSDARG00000008032Danio rerio
 SART3ENSGALG00000039472Gallus gallus
 Sart3ENSMUSG00000018974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003107  HAT (Half-A-TPR) repeat
 IPR008669  LSM-interacting domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR034217  SART3, RNA recognition motif 1
 IPR034218  SART3, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000244 spliceosomal tri-snRNP complex assembly IDA
 biological_processGO:0000387 spliceosomal snRNP assembly IDA
 biological_processGO:0000398 mRNA splicing, via spliceosome IDA
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0006334 nucleosome assembly IDA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0010468 regulation of gene expression IDA
 biological_processGO:0048872 homeostasis of number of cells IEA
 biological_processGO:0071425 hematopoietic stem cell proliferation IEA
 biological_processGO:1903586 positive regulation of histone deubiquitination IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005691 U6atac snRNP IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0071001 U4/U6 snRNP IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017070 U6 snRNA binding IDA
 molecular_functionGO:0030621 U4 snRNA binding IDA
 molecular_functionGO:0030624 U6atac snRNA binding IDA
 molecular_functionGO:0042393 histone binding IDA
 molecular_functionGO:1990381 ubiquitin-specific protease binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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