ENSGALG00000039472


Gallus gallus

Features
Gene ID: ENSGALG00000039472
  
Biological name :SART3
  
Synonyms : SART3 / squamous cell carcinoma antigen recognized by T cells 3
  
Possible biological names infered from orthology : Mus musculus squamous cell carcinoma antigen recognized by T cells 3 (Sart3), transcript variant 3, mRNA. / Q15020 / Q9JLI8
  
Species: Gallus gallus
  
Chr. number: 15
Strand: -1
Band:
Gene start: 6563072
Gene end: 6575926
  
Corresponding Affymetrix probe sets: GgaAffx.21161.1.S1_at (Chicken Array)   GgaAffx.21473.1.S1_at (Chicken Array)   GgaAffx.6091.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047133
Ensembl peptide - ENSGALP00000055932
Ensembl peptide - ENSGALP00000050185
NCBI entrez gene - 416890     See in Manteia.
RefSeq - XM_004945611
swissprot - A0A1D5PSP5
swissprot - A0A1D5PBQ5
swissprot - A0A1D5P378
Ensembl - ENSGALG00000039472
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sart3ENSDARG00000008032Danio rerio
 SART3ENSG00000075856Homo sapiens
 Sart3ENSMUSG00000018974Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR003107  HAT (Half-A-TPR) repeat
 IPR008669  LSM-interacting domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000244 spliceosomal tri-snRNP complex assembly IEA
 biological_processGO:0000387 spliceosomal snRNP assembly IEA
 biological_processGO:0000398 mRNA splicing, via spliceosome IEA
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0006334 nucleosome assembly IEA
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0048872 homeostasis of number of cells IEA
 biological_processGO:0071425 hematopoietic stem cell proliferation IEA
 biological_processGO:1903586 positive regulation of histone deubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005691 U6atac snRNP IEA
 cellular_componentGO:0015030 Cajal body IEA
 cellular_componentGO:0071001 U4/U6 snRNP IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0017070 U6 snRNA binding IEA
 molecular_functionGO:0030621 U4 snRNA binding IEA
 molecular_functionGO:0030624 U6atac snRNA binding IEA
 molecular_functionGO:0042393 histone binding IEA
 molecular_functionGO:1990381 ubiquitin-specific protease binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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