ENSG00000077312


Homo sapiens

Features
Gene ID: ENSG00000077312
  
Biological name :SNRPA
  
Synonyms : P09012 / small nuclear ribonucleoprotein polypeptide A / SNRPA
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.2
Gene start: 40750637
Gene end: 40765389
  
Corresponding Affymetrix probe sets: 201770_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000469224
Ensembl peptide - ENSP00000470534
Ensembl peptide - ENSP00000471230
Ensembl peptide - ENSP00000472258
Ensembl peptide - ENSP00000472355
Ensembl peptide - ENSP00000472449
Ensembl peptide - ENSP00000243563
NCBI entrez gene - 6626     See in Manteia.
OMIM - 182285
RefSeq - NM_004596
RefSeq Peptide - NP_004587
swissprot - P09012
swissprot - M0QXK2
swissprot - M0QZG7
swissprot - M0R0G9
swissprot - M0R221
swissprot - M0R268
swissprot - M0R2B8
Ensembl - ENSG00000077312
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snrpaENSDARG00000018890Danio rerio
 Gm5145ENSMUSG00000071273Mus musculus
 SnrpaENSMUSG00000061479Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P08579 / SNRPB2 / small nuclear ribonucleoprotein polypeptide B2ENSG0000012587031


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034407  U1 small nuclear ribonucleoprotein A, RNA recognition motif 1
 IPR034409  U1 small nuclear ribonucleoprotein A, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IC
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:1900363 regulation of mRNA polyadenylation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005681 spliceosomal complex IDA
 cellular_componentGO:0005685 U1 snRNP IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0035614 snRNA stem-loop binding IBA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:1990446 U1 snRNP binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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